Abstract: Metals are required for life, and microbes have evolved a number of small molecules to compete for, acquire, and utilize metals. Metal-binding compounds are important in a number of fields – these compounds can alter the growth of the microbial communities, enhance plant yields, control harmful pathogens, deliver metals in diseases of deficiencies, or can be used for bioremediation. Systematic methods for the discovery of metal-small molecule complexes from biological samples remain limited.